My Autossomal HarappaWorld Admixture Proportions

My Autossomal HarappaWorld Admixture Proportions

GENY DOS SANTOS FLORENTINO

My Autossomal HarappaWorld Admixture Proportions

HarappaWorld Admixture Proportions

This utility uses the HarappaWorld model, created by Zack. Questions and comments about this model
should be directed to him at harappa@zackvision.com or to his HarappaWorld blog.
We appreciate him making this excellent tool available here.

Kit Number: F229750   Iteration: 1000   Delta-Q: 2.039842e-01   Elapsed Time: 88.38 seconds

Population   S-Indian 0.27% Baloch 0.79% Caucasian 0.77% NE-Euro 2.80% SE-Asian -     Siberian 0.30% NE-Asian -     Papuan 0.21% American 1.12% Beringian 0.24% Mediterranean 2.82% SW-Asian -     San 1.53% E-African 5.40% Pygmy 4.67% W-African 79.07%

                                

Web site and contents ©Copyright 2011-2014 by GEDmatch, Inc.
Genealogy and DNA data remains the property of the submitter.
Each Admixture Proportions 'calculator' model remains the property of its developer.

GEDmatch.Com Oracle

This program is based on 'Oracle v1' by Dienekes Pontikos. His original program was developed as part of the Dodecad Ancestry Project. More information on Dienekes' orignal program can be found here.

Many thanks also to Zack Ajmal for helping us get this web version of Dienekes' Oracle program developed.

HarappaWorld Oracle results:

23 April 2013 - Oracle reference population percentages revised.

Kit F229750

Admix Results (sorted):

#	Population	Percent
1	W-African	79.07
2	E-African	5.4
3	Pygmy	4.67
4	Mediterranean	2.82
5	NE-Euro	2.8
6	San	1.53
7	American	1.12
8	Baloch	0.79
9	Caucasian	0.77
10	Siberian	0.3
11	S-Indian	0.27
12	Beringian	0.24
13	Papuan	0.21

Single Population Sharing:

#	Population (source)	Distance
1	fang (henn2012)	8.06
2	kongo (henn2012)	8.92
3	african-caribbean (1000genomes)	8.93
4	kaba (henn2012)	9.74
5	african-american (1000genomes)	9.78
6	bamoun (henn2012)	10.69
7	mandenka (hgdp)	15.11
8	hausa (henn2012)	15.76
9	igbo (henn2012)	18
10	bambaran (xing)	18.64
11	brong (henn2012)	19.42
12	bantusouthafrica (hgdp)	19.96
13	dogon (xing)	20.46
14	pedi (xing)	20.66
15	yoruba (hgdp)	21.75
16	yoruba (hapmap)	21.81
17	nguni (xing)	22.2
18	yoruba (1000genomes)	22.47
19	fulani (henn2012)	28.39
20	bantukenya (hgdp)	28.63

Mixed Mode Population Sharing:

#		Primary Population (source)			Secondary Population (source)			Distance
1		85.4%	african-caribbean (1000genomes)	+	14.6%	alur (xing)	@	1.76
2		77.1%	african-caribbean (1000genomes)	+	22.9%	bantukenya (hgdp)	@	2.81
3		82.5%	bamoun (henn2012)	+	17.5%	dominican (bryc)	@	2.82
4		52.5%	kongo (henn2012)	+	47.5%	african-american (1000genomes)	@	2.86
5		78.3%	african-caribbean (1000genomes)	+	21.7%	luhya (1000genomes)	@	2.91
6		88.6%	bamoun (henn2012)	+	11.4%	puerto-rican (1000genomes)	@	2.97
7		91.7%	african-caribbean (1000genomes)	+	8.3%	hadza (henn2011)	@	3.22
8		87%	african-caribbean (1000genomes)	+	13%	hema (xing)	@	3.23
9		90.3%	bamoun (henn2012)	+	9.7%	french (hgdp)	@	3.32
10		90.4%	african-caribbean (1000genomes)	+	9.6%	sandawe (henn2011)	@	3.32
11		90.2%	bamoun (henn2012)	+	9.8%	spaniard (1000genomes)	@	3.36
12		90.1%	bamoun (henn2012)	+	9.9%	italian (hgdp)	@	3.37
13		89.4%	bamoun (henn2012)	+	10.6%	colombian (1000genomes)	@	3.43
14		55.7%	fang (henn2012)	+	44.3%	african-american (1000genomes)	@	3.45
15		90.1%	bamoun (henn2012)	+	9.9%	romanian-a (behar)	@	3.49
16		90.3%	bamoun (henn2012)	+	9.7%	hungarian (behar)	@	3.56
17		90.1%	bamoun (henn2012)	+	9.9%	tuscan (hapmap)	@	3.58
18		52.5%	african-american (1000genomes)	+	47.5%	bamoun (henn2012)	@	3.59
19		90.5%	bamoun (henn2012)	+	9.5%	utahn-white (1000genomes)	@	3.59
20		90.1%	bamoun (henn2012)	+	9.9%	bulgarian (yunusbayev)	@	3.6

Gedmatch.Com

HarappaWorld 4-Ancestors Oracle

This program is based on 4-Ancestors Oracle Version 0.96 by Alexandr Burnashev.
Questions about results should be sent to him at: Alexandr.Burnashev@gmail.com
Original concept proposed by Sergey Kozlov.
Many thanks to Alexandr for helping us get this web version developed.

Revised: Dec 6, 2012

16 components mode.
Component threshold auto-set to 0.760%. Admix results below that value will not be considered.


Kit Number: F229750

Admix Results (sorted):

#	Population	Percent
1	W-African	79.89
2	E-African	5.46
3	Pygmy	4.72
4	Mediterranean	2.84
5	NE-Euro	2.83
6	San	1.55
7	American	1.14
8	Baloch	0.80
9	Caucasian	0.78

--------------------------------

Least-squares method.

Using 1 population approximation:
1 fang @ 7.246
2 kongo @ 8.085
3 african-caribbean @ 8.230
4 bamoun @ 9.892
5 kaba @ 9.950
6 african-american @ 10.638
7 mandenka @ 14.089
8 hausa @ 14.700
9 igbo @ 17.024
10 bambaran @ 17.574
377 iterations.



Using 2 populations approximation:
1 50% african-american +50% kongo @ 2.983
2 50% african-american +50% bamoun @ 3.457
3 50% african-american +50% fang @ 3.912
4 50% african-caribbean +50% kaba @ 4.598
5 50% african-american +50% kaba @ 4.737
6 50% african-caribbean +50% fang @ 5.179
7 50% african-american +50% hausa @ 5.409
8 50% african-american +50% mandenka @ 5.441
9 50% african-american +50% african-caribbean @ 6.485
10 50% african-caribbean +50% kongo @ 6.571
71253 iterations.



Using 3 populations approximation:
1 50% african-american +25% bamoun +25% kaba @ 2.397
2 50% african-caribbean +25% african-caribbean +25% bantukenya @ 2.759
3 50% african-american +25% kaba +25% kongo @ 2.776
4 50% african-american +25% hausa +25% kaba @ 2.855
5 50% african-american +25% igbo +25% kaba @ 2.857
6 50% african-american +25% kaba +25% mandenka @ 2.945
7 50% kongo +25% african-american +25% kaba @ 2.950
8 50% african-american +25% fang +25% hausa @ 2.979
9 50% african-american +25% kongo +25% kongo @ 2.983
10 50% kongo +25% african-american +25% african-american @ 2.983

Gedmatch.Com

HarappaWorld Oracle-x Population Fitting

This program is based on Larry Smiser's Population Fitting spreadsheet.
Questions about the method or results should be sent to him at lwsmiser@gmail.com


Finished reading population data. 377 populations found.
16 population clusters.

Kit Number: F229750

Admix Results:

#	Population	Percent
1	S-Indian	0.27
2	Baloch	0.79
3	Caucasian	0.77
4	NE-Euro	2.80
5	SE-Asian	0.00
6	Siberian	0.30
7	NE-Asian	0.00
8	Papuan	0.21
9	American	1.12
10	Beringian	0.24
11	Mediterranean	2.82
12	SW-Asian	0.00
13	San	1.53
14	E-African	5.40
15	Pygmy	4.67
16	W-African	79.07

Pct. Calc. Option 2

0	Unable to determine	0.67%
1	bamoun	45.70%
2	mandenka	37.43%
3	french	5.96%
4	bulala	5.66%
5	nguni	2.56%
6	pygmy	1.04%
7	pima	0.97%
8	luhya	0.01%
9	ariblacksmith	0.00%
10	mada	0.00%

Total RMSD: 0.366722


Elapsed time 3.9261 seconds.