sábado, 29 de março de 2014

My Autossomal Dodecad V3 Admixture Proportions

My Autossomal Dodecad V3 Admixture Proportions

GENY DOS SANTOS FLORENTINO

My Autossomal Dodecad V3 Admixture Proportions


The Dodecad V3 (dv3) admixture calculator is courtesy of Dienekes Pontikos and was developed as part of the Dodecad Ancestry Project; more information here.

Kit Number: F229750   Iteration: 1000   Delta-Q: 2.652475e-02   Elapsed Time: 59.72 seconds



Population
East_European2.08%
West_European1.77%
Mediterranean-    
Neo_African51.44%
West_Asian-    
South_Asian0.77%
Northeast_Asian1.10%
Southeast_Asian-    
East_African9.44%
Southwest_Asian-    
Northwest_African3.15%
Palaeo_African30.21%














Web site and contents ©Copyright 2011-2014 by GEDmatch, Inc.
Genealogy and DNA data remains the property of the submitter.
Each Admixture Proportions 'calculator' model remains the property of its developer.
GEDmatch.Com Oracle
This program is based on 'Oracle v1' by Dienekes Pontikos. His original program was developed as part of the Dodecad Ancestry Project. More information on Dienekes' orignal program can be found here.

Many thanks also to 
Zack Ajmal for helping us get this web version of Dienekes' Oracle program developed.


Dodecad V3 Oracle results:
The GEDmatch version of Oracle may give slightly different results from Dienekes version. The GEDmatch version uses FST weighting in its calculations.

Kit F229750

Admix Results (sorted):

#
Population
Percent
1
Neo_African
51.44
2
Palaeo_African
30.21
3
East_African
9.44
4
Northwest_African
3.15
5
East_European
2.08
6
West_European
1.77
7
Northeast_Asian
1.1
8
South_Asian
0.77
9
Mediterranean
0.02

Single Population Sharing:

#
Population (source)
Distance
1
Kaba (Henn)
7.56
2
LWK (HapMap)
7.72
3
Luhya (Henn)
8.77
4
Kongo (Henn)
8.78
5
Hausa (Henn)
8.97
6
Bamoun (Henn)
9.04
7
Luhya (Xing)
9.59
8
Fang (Henn)
9.9
9
Brong (Henn)
10.15
10
Igbo (Henn)
10.32
11
Mada (Henn)
11.82
12
ASW (HapMap)
11.84
13
Nguni (Xing)
12.29
14
Bambaran (Xing)
12.97
15
Pedi (Xing)
12.99
16
Xhosa (Henn)
15.44
17
Dogon (Xing)
15.51
18
Yoruba (Henn)
17.44
19
Alur (Xing)
18.86
20
Sotho_Tswana (Xing)
19.45

Mixed Mode Population Sharing:

#

Primary Population (source)
Secondary Population (source)
Distance
1

87.2%
Bamoun (Henn)
+
12.8%
Morocco_S (Henn)
@
3.68
2

76.1%
Kongo (Henn)
+
23.9%
Fulani (Henn)
@
3.72
3

91.4%
Bamoun (Henn)
+
8.6%
Chuvashs_16 (Behar)
@
3.85
4

90.1%
Bamoun (Henn)
+
9.9%
Morocco_N (Henn)
@
3.89
5

89.3%
Bamoun (Henn)
+
10.7%
Algeria (Henn)
@
3.95
6

89.6%
Bamoun (Henn)
+
10.4%
Sahara_OCC (Henn)
@
4.01
7

91.7%
Bamoun (Henn)
+
8.3%
Russian (HGDP)
@
4.07
8

90.8%
Bamoun (Henn)
+
9.2%
TUNISIA (Henn)
@
4.09
9

75.9%
Bamoun (Henn)
+
24.1%
Fulani (Henn)
@
4.12
10

91.6%
Bamoun (Henn)
+
8.4%
Mixed_Slav (Dodecad)
@
4.16
11

58.9%
Kongo (Henn)
+
41.1%
ASW (HapMap)
@
4.16
12

90.5%
Bamoun (Henn)
+
9.5%
North_African (Dodecad)
@
4.17
13

87.9%
Kongo (Henn)
+
12.1%
Morocco_S (Henn)
@
4.18
14

89.7%
Bamoun (Henn)
+
10.3%
Moroccans (Behar)
@
4.2
15

91.9%
Bamoun (Henn)
+
8.1%
Finnish (Dodecad)
@
4.24
16

91.7%
Bamoun (Henn)
+
8.3%
Polish (Dodecad)
@
4.25
17

73.9%
Fang (Henn)
+
26.1%
Fulani (Henn)
@
4.28
18

91.5%
Bamoun (Henn)
+
8.5%
Hungarians (Behar)
@
4.3
19

58.1%
Bamoun (Henn)
+
41.9%
ASW (HapMap)
@
4.3
20

91.5%
Bamoun (Henn)
+
8.5%
Slovenian (Xing)
@
4.33
Gedmatch.Com
Dodecad V3 4-Ancestors Oracle
This program is based on 4-Ancestors Oracle Version 0.96 by Alexandr Burnashev.
Questions about results should be sent to him at: Alexandr.Burnashev@gmail.com
Original concept proposed by Sergey Kozlov.
Many thanks to Alexandr for helping us get this web version developed.

Revised: Dec 6, 2012

12 components mode.
Component threshold auto-set to 1.010%. Admix results below that value will not be considered.


Kit Number: F229750

Admix Results (sorted):

#
Population
Percent
1
Neo_African
51.85
2
Palaeo_African
30.46
3
East_African
9.52
4
Northwest_African
3.18
5
East_European
2.10
6
West_European
1.79
7
Northeast_Asian
1.11


--------------------------------

Least-squares method.

Using 1 population approximation:
1 Kaba @ 7.034
2 Kongo @ 7.217
3 Bamoun @ 7.579
4 Hausa @ 7.640
5 LWK @ 7.697
6 Fang @ 7.977
7 Brong @ 8.612
8 Igbo @ 8.765
9 Luhya @ 9.054
10 Luhya @ 9.675
227 iterations.



Using 2 populations approximation:
1 50% ASW +50% Kongo @ 5.016
2 50% ASW +50% Bamoun @ 5.050
3 50% ASW +50% Fang @ 5.210
4 50% ASW +50% Hausa @ 5.401
5 50% ASW +50% Kaba @ 5.438
6 50% ASW +50% Brong @ 5.527
7 50% ASW +50% Igbo @ 5.529
8 50% ASW +50% LWK @ 5.959
9 50% Igbo +50% Luhya @ 6.183
10 50% Mandenka +50% Alur @ 6.204
25878 iterations.



Using 3 populations approximation:
1 50% Hausa +25% ASW +25% Pedi @ 3.750
2 50% Hausa +25% ASW +25% Nguni @ 3.867
3 50% Kongo +25% Bamoun +25% Fulani @ 3.946
4 50% Kongo +25% Fulani +25% Kongo @ 3.948
5 50% Bamoun +25% Fang +25% Fulani @ 3.967
6 50% Kongo +25% ASW +25% Luhya @ 3.997
7 50% Bamoun +25% ASW +25% Luhya @ 4.003
8 50% Nguni +25% Fulani +25% Yoruba @ 4.008
9 50% Fang +25% Brong +25% Fulani @ 4.009
10 50% Brong +25% Fulani +25% Sotho_Tswana @ 4.010
365881 iterations.



Using 4 populations approximation:
1 ASW + Hausa + Hausa + Pedi @ 3.750
2 ASW + Hausa + Kaba + Pedi @ 3.797
3 ASW + LWK + Fang + Hausa @ 3.818
4 ASW + Fang + Hausa + Luhya @ 3.826
5 ASW + Fang + Hausa + Luhya @ 3.830
6 ASW + Hausa + Kongo + Luhya @ 3.849
7 ASW + LWK + Hausa + Kongo @ 3.866
8 ASW + Hausa + Hausa + Nguni @ 3.867
9 ASW + Igbo + Kongo + Luhya @ 3.871
10 ASW + Luhya + Dogon + Pedi @ 3.872
11 ASW + Brong + Fang + Luhya @ 3.873
12 ASW + Dogon + Luhya + Pedi @ 3.874
13 ASW + Fang + Igbo + Luhya @ 3.876
14 ASW + Mandenka + Alur + Pedi @ 3.892
15 ASW + Fang + Igbo + Luhya @ 3.893
16 ASW + Brong + Kongo + Luhya @ 3.895
17 ASW + Hausa + Kaba + Nguni @ 3.899
18 ASW + Brong + Fang + Luhya @ 3.899
19 ASW + Hausa + Kongo + Luhya @ 3.900
20 ASW + Yoruba + Luhya + Pedi @ 3.900

4704189 iterations.

Done.

Elapsed time 2.7317 seconds.
Gedmatch.Com
Dodecad V3 Oracle-x Population Fitting
This program is based on Larry Smiser's Population Fitting spreadsheet.
Questions about the method or results should be sent to him at lwsmiser@gmail.com


Finished reading population data.
227 populations found.
12 population clusters.

Kit Number: F229750

Admix Results:

#
Population
Percent
1
East_European
2.08
2
West_European
1.77
3
Mediterranean
0.02
4
Neo_African
51.44
5
West_Asian
0.00
6
South_Asian
0.77
7
Northeast_Asian
1.10
8
Southeast_Asian
0.00
9
East_African
9.44
10
Southwest_Asian
0.00
11
Northwest_African
3.15
12
Palaeo_African
30.21


Pct. Calc. Option 2

0
Unable to determine
0.01%
1
Bamoun
69.78%
2
YRI
12.07%
3
Mozabite
5.72%
4
Maasai
4.52%
5
Chuvashs_16
4.51%
6
Bulala
2.38%
7
Finnish
0.99%
8
East_African
0.01%
9
Siddi
0.00%
10
Vaish
0.00%

Total RMSD: 0.668277


Elapsed time 0.5593 seconds.

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