GEDmatch.Com
Oracle
This program is based on
'Oracle v1' by Dienekes Pontikos. His original program was
developed as part of the Dodecad Ancestry
Project. More
information on Dienekes' orignal program can be found here.
Many thanks also to Zack
Ajmal for helping us get
this web version of Dienekes' Oracle program developed.
Dodecad K12b
Oracle results:
The GEDmatch version of
Oracle may give slightly different results from Dienekes version. The GEDmatch
version uses FST weighting in its calculations.
Kit F229750
Admix Results (sorted):
#
|
Population
|
Percent
|
1
|
Sub_Saharan
|
81.67
|
2
|
East_African
|
9.03
|
3
|
North_European
|
3.4
|
4
|
Northwest_African
|
1.79
|
5
|
Siberian
|
1.22
|
6
|
Atlantic_Med
|
1.16
|
7
|
Caucasus
|
0.76
|
8
|
Gedrosia
|
0.71
|
9
|
South_Asian
|
0.26
|
Single Population Sharing:
#
|
Population
(source)
|
Distance
|
1
|
Bantu_S.E._Tswana
(HGDP)
|
9.02
|
2
|
ASW30
(HapMap3)
|
9.97
|
3
|
Bantu_S.W._Herero
(HGDP)
|
12.36
|
4
|
Bantu_N.E.
(HGDP)
|
16.14
|
5
|
LWK30
(Behar)
|
18.56
|
6
|
Mandenka
(HGDP)
|
21.85
|
7
|
Yoruba
(HGDP)
|
24.84
|
8
|
YRI30
(HGDP)
|
24.84
|
9
|
MKK30
(Dodecad)
|
88.94
|
10
|
Sandawe_He
(Henn)
|
90.76
|
11
|
Yemenese
(Behar)
|
98.92
|
12
|
Algerian
(Dodecad)
|
99.43
|
13
|
Moroccans
(Behar)
|
100.98
|
14
|
Egyptans
(Behar)
|
102.51
|
15
|
Moroccan
(Dodecad)
|
105.5
|
16
|
Jordanians
(Behar)
|
107.17
|
17
|
Uzbeks
(Behar)
|
107.41
|
18
|
Turkmens
(Yunusbayev)
|
107.6
|
19
|
Palestinian
(HGDP)
|
107.8
|
20
|
Tajiks
(Yunusbayev)
|
107.82
|
Mixed Mode Population Sharing:
#
|
|
Primary
Population (source)
|
Secondary
Population (source)
|
Distance
|
1
|
|
90.4%
|
Bantu_S.W._Herero
(HGDP)
|
+
|
9.6%
|
Chuvashs
(Behar)
|
@
|
2.9
|
2
|
|
62.6%
|
ASW30
(HapMap3)
|
+
|
37.4%
|
Bantu_N.E.
(HGDP)
|
@
|
3.18
|
3
|
|
90.4%
|
Bantu_S.W._Herero
(HGDP)
|
+
|
9.6%
|
Hungarians
(Behar)
|
@
|
3.21
|
4
|
|
90.3%
|
Bantu_S.W._Herero
(HGDP)
|
+
|
9.7%
|
Romanians
(Behar)
|
@
|
3.37
|
5
|
|
93.1%
|
Bantu_S.E._Tswana
(HGDP)
|
+
|
6.9%
|
Chuvashs
(Behar)
|
@
|
3.4
|
6
|
|
90.5%
|
Bantu_S.W._Herero
(HGDP)
|
+
|
9.5%
|
German
(Dodecad)
|
@
|
3.4
|
7
|
|
90.3%
|
Bantu_S.W._Herero
(HGDP)
|
+
|
9.7%
|
Bulgarian
(Dodecad)
|
@
|
3.41
|
8
|
|
66.1%
|
ASW30
(HapMap3)
|
+
|
33.9%
|
LWK30
(Behar)
|
@
|
3.41
|
9
|
|
90.7%
|
Bantu_S.W._Herero
(HGDP)
|
+
|
9.3%
|
Mordovians
(Yunusbayev)
|
@
|
3.44
|
10
|
|
90.3%
|
Bantu_S.W._Herero
(HGDP)
|
+
|
9.7%
|
Bulgarians
(Yunusbayev)
|
@
|
3.48
|
11
|
|
90.8%
|
Bantu_S.W._Herero
(HGDP)
|
+
|
9.2%
|
Russian
(HGDP)
|
@
|
3.51
|
12
|
|
93.3%
|
Bantu_S.E._Tswana
(HGDP)
|
+
|
6.7%
|
Mordovians
(Yunusbayev)
|
@
|
3.56
|
13
|
|
93.4%
|
Bantu_S.E._Tswana
(HGDP)
|
+
|
6.6%
|
Russian
(HGDP)
|
@
|
3.57
|
14
|
|
90.7%
|
Bantu_S.W._Herero
(HGDP)
|
+
|
9.3%
|
Ukranians
(Yunusbayev)
|
@
|
3.6
|
15
|
|
90.5%
|
Bantu_S.W._Herero
(HGDP)
|
+
|
9.5%
|
Mixed_Germanic
(Dodecad)
|
@
|
3.6
|
16
|
|
93.1%
|
Bantu_S.E._Tswana
(HGDP)
|
+
|
6.9%
|
Hungarians
(Behar)
|
@
|
3.63
|
17
|
|
90.8%
|
Bantu_S.W._Herero
(HGDP)
|
+
|
9.2%
|
Mixed_Slav
(Dodecad)
|
@
|
3.65
|
18
|
|
93.4%
|
Bantu_S.E._Tswana
(HGDP)
|
+
|
6.6%
|
Mixed_Slav
(Dodecad)
|
@
|
3.66
|
19
|
|
93.4%
|
Bantu_S.E._Tswana
(HGDP)
|
+
|
6.6%
|
Ukranians
(Yunusbayev)
|
@
|
3.67
|
20
|
|
90.6%
|
Bantu_S.W._Herero
(HGDP)
|
+
|
9.4%
|
Dutch
(Dodecad)
|
@
|
3.67
|
Gedmatch.Com
Dodecad K12b 4-Ancestors Oracle
This program is based on
4-Ancestors Oracle Version 0.96 by Alexandr Burnashev.
Questions about results should be sent to him
at: Alexandr.Burnashev@gmail.com
Original concept proposed by Sergey Kozlov.
Many thanks to Alexandr for helping us get this
web version developed.
Revised: Dec 6, 2012
12 components mode.
Component threshold auto-set to 1.010%. Admix
results below that value will not be considered.
Kit Number: F229750
Admix Results (sorted):
#
|
Population
|
Percent
|
1
|
Sub_Saharan
|
83.11
|
2
|
East_African
|
9.19
|
3
|
North_European
|
3.46
|
4
|
Northwest_African
|
1.82
|
5
|
Siberian
|
1.24
|
6
|
Atlantic_Med
|
1.18
|
--------------------------------
Least-squares method.
Using 1 population approximation:
1 Bantu_S.E._Tswana @ 6.963
2 Bantu_S.E._Pedi @ 7.000
3 Bantu_S.E._Zulu @ 7.735
4 Bantu_S.E._S.Sotho @ 8.003
5 Bantu_S.W._Herero @ 9.159
6 ASW30 @ 9.553
7 Bantu_S.W._Ovambo @ 11.668
8 Bantu_N.E. @ 15.185
9 LWK30 @ 17.359
10 Mandenka @ 17.368
223 iterations.
Using 2 populations approximation:
1 50% ASW30 +50% Bantu_S.E._Tswana @ 4.246
2 50% ASW30 +50% Bantu_S.E._Pedi @ 4.355
3 50% ASW30 +50% Bantu_N.E. @ 4.776
4 50% ASW30 +50% Bantu_S.E._Zulu @ 5.341
5 50% ASW30 +50% Bantu_S.E._S.Sotho @ 5.585
6 50% ASW30 +50% LWK30 @ 5.801
7 50% LWK30 +50% Mandenka @ 5.950
8 50% Bantu_N.E. +50% Mandenka @ 6.131
9 50% ASW30 +50% Bantu_S.W._Herero @ 6.466
10 50% Bantu_S.E._Tswana +50% Bantu_S.E._Tswana
@ 6.963
24976 iterations.
Using 3 populations approximation:
1 50% ASW30 +25% Bantu_S.E._S.Sotho +25% LWK30 @
2.751
2 50% ASW30 +25% Bantu_S.E._Zulu +25% LWK30 @
2.761
3 50% ASW30 +25% Bantu_N.E. +25% Bantu_S.E._Pedi
@ 2.761
4 50% ASW30 +25% Bantu_N.E. +25%
Bantu_S.E._Tswana @ 2.769
5 50% ASW30 +25% Bantu_N.E. +25% Bantu_S.E._Zulu
@ 2.769
6 50% ASW30 +25% Bantu_S.W._Herero +25% LWK30 @
2.774
7 50% ASW30 +25% Bantu_N.E. +25%
Bantu_S.E._S.Sotho @ 2.790
8 50% ASW30 +25% Bantu_S.E._Pedi +25% LWK30 @
2.882
9 50% ASW30 +25% Bantu_S.E._Tswana +25% LWK30 @
2.904
10 50% ASW30 +25% Bantu_N.E. +25% Bantu_S.W._Herero
@ 2.916
369043 iterations.
Using 4 populations approximation:
1 ASW30 + ASW30 + Bantu_S.E._S.Sotho + LWK30 @
2.751
2 ASW30 + ASW30 + Bantu_S.E._Zulu + LWK30 @
2.761
3 ASW30 + ASW30 + Bantu_N.E. + Bantu_S.E._Pedi @
2.761
4 ASW30 + ASW30 + Bantu_N.E. + Bantu_S.E._Tswana
@ 2.769
5 ASW30 + ASW30 + Bantu_N.E. + Bantu_S.E._Zulu @
2.769
6 ASW30 + ASW30 + Bantu_S.W._Herero + LWK30 @
2.774
7 ASW30 + ASW30 + Bantu_N.E. +
Bantu_S.E._S.Sotho @ 2.790
8 ASW30 + ASW30 + Bantu_S.E._Pedi + LWK30 @
2.882
9 ASW30 + ASW30 + Bantu_S.E._Tswana + LWK30 @
2.904
10 ASW30 + ASW30 + Bantu_N.E. +
Bantu_S.W._Herero @ 2.916
11 ASW30 + ASW30 + Bantu_S.W._Ovambo + LWK30 @
3.008
12 ASW30 + ASW30 + Bantu_N.E. +
Bantu_S.W._Ovambo @ 3.298
13 ASW30 + Bantu_N.E. + Bantu_N.E. + Mandenka @
3.672
14 ASW30 + ASW30 + LWK30 + Mandenka @ 3.885
15 ASW30 + Bantu_S.E._Tswana + LWK30 + Mandenka
@ 3.897
16 ASW30 + Bantu_N.E. + LWK30 + Mandenka @ 3.910
17 ASW30 + Bantu_S.E._Pedi + LWK30 + Mandenka @
3.930
18 ASW30 + Bantu_S.E._Tswana + Bantu_S.W._Ovambo
+ LWK30 @ 4.036
19 ASW30 + Bantu_S.E._S.Sotho +
Bantu_S.W._Herero + LWK30 @ 4.036
20 ASW30 + Bantu_N.E. + Bantu_S.E._S.Sotho +
Bantu_S.E._S.Sotho @ 4.036
5362352 iterations.
Done.
Elapsed time 6.0168 seconds.
Gedmatch.Com
Dodecad K12b Oracle-x
Population Fitting
This program is based on
Larry Smiser's Population Fitting spreadsheet.
Questions about the method or results should be
sent to him at lwsmiser@gmail.com
Finished reading population data. 223
populations found.
12 population clusters.
Kit Number: F229750
Admix Results:
#
|
Population
|
Percent
|
1
|
Gedrosia
|
0.71
|
2
|
Siberian
|
1.22
|
3
|
Northwest_African
|
1.79
|
4
|
Southeast_Asian
|
0.00
|
5
|
Atlantic_Med
|
1.16
|
6
|
North_European
|
3.40
|
7
|
South_Asian
|
0.26
|
8
|
East_African
|
9.03
|
9
|
Southwest_Asian
|
0.00
|
10
|
East_Asian
|
0.00
|
11
|
Caucasus
|
0.76
|
12
|
Sub_Saharan
|
81.67
|
Pct. Calc. Option 2
0
|
Unable
to determine
|
0.16%
|
1
|
Bantu_S.W._Herero
|
50.35%
|
2
|
Bantu_S.E._Tswana
|
35.22%
|
3
|
Chuvashs
|
5.61%
|
4
|
Mandenka
|
4.17%
|
5
|
Algerian
|
2.01%
|
6
|
Moroccan
|
0.93%
|
7
|
LWK30
|
0.79%
|
8
|
Mordovians
|
0.36%
|
9
|
Moroccans
|
0.33%
|
10
|
Bantu_N.E.
|
0.03%
|
Total RMSD: 0.276845
Elapsed time 0.7695 seconds.
|
Nenhum comentário:
Postar um comentário