sábado, 29 de março de 2014

My Autossomal MDLP K=8 Admixture Proportions

My Autossomal MDLP K=8 Admixture Proportions
GENY DOS SANTOS FLORENTINO
My Autossomal MDLP K=8 Admixture Proportions

MDLP K=8 Admixture Proportions


Magnus Ducatus Lituaniae Project K=8

For questions or comments about this project or your results, please email vadimverenich@gmail.com or visit the BGA project

MDLP was designed for individuals with European and some Eurasian ancestry (mostly Finno-Uralic and Altaic). This tool is not recommended for inferring African-American, East-Asian etc. ancestry.

Kit Number: F229750   Iteration: 1000   Delta-Q: 5.714560e-05   Elapsed Time: 65.85 seconds

Population 
Altaic_Turkic31.41%
Paleo_Scandinavian0.76%
South_Central_Asian14.12%
East_European-    
West_European-    
Caucasian26.81%
Paleo_Mediterranean23.40%
Volga_Finnic3.50%


GEDmatch.Com Oracle
This program is based on 'Oracle v1' by Dienekes Pontikos. His original program was developed as part of the Dodecad Ancestry Project. More information on Dienekes' orignal program can be found here.

Many thanks also to 
Zack Ajmal for helping us get this web version of Dienekes' Oracle program developed.


MDLP K=8 Oracle results:
Kit F229750

Admix Results (sorted):

#
Population
Percent
1
Altaic_Turkic
31.41
2
Caucasian
26.81
3
Paleo_Mediterranean
23.4
4
South_Central_Asian
14.12
5
Volga_Finnic
3.5
6
Paleo_Scandinavian
0.76

Single Population Sharing:

#
Population (source)
Distance
1
UZ (Uzbek)
28.76
2
NOG (Nogai)
30.76
3
TRK (Turk)
37.12
4
BSHK (Bashkir)
42.1
5
ASHK (Ashkenazi)
42.45
6
CITAL (Central-Italian)
45.19
7
SIC (Sicilian)
45.28
8
GRK (Greek)
45.28
9
TTR (Tatar)
46.59
10
RMN (Romanian)
48.33
11
CPR (Cypriot)
48.72
12
NITAL (North-Italian)
48.95
13
GGZ (Gagauz)
49.03
14
BLG (Bulgarian)
50.11
15
ARM (Armenian)
52.02
16
CRS (Corsican)
52.15
17
MCD (Macedonian)
52.26
18
KSV (Albanian)
53.02
19
MNT (Montenegrin)
54.18
20
SRB (Serbian)
55.49

Mixed Mode Population Sharing:

#

Primary Population (source)
Secondary Population (source)
Distance
1

63.9%
UZ (Uzbek)
+
36.1%
CPR (Cypriot)
@
10.12
2

62.3%
UZ (Uzbek)
+
37.7%
SIC (Sicilian)
@
11.02
3

60.8%
UZ (Uzbek)
+
39.2%
ASHK (Ashkenazi)
@
11.43
4

62.7%
UZ (Uzbek)
+
37.3%
GRK (Greek)
@
12.55
5

62.8%
UZ (Uzbek)
+
37.2%
CITAL (Central-Italian)
@
12.97
6

55.7%
CPR (Cypriot)
+
44.3%
KZK (Kazakh)
@
13.98
7

57.9%
UZ (Uzbek)
+
42.1%
TRK (Turk)
@
14.28
8

60.6%
CPR (Cypriot)
+
39.4%
KGZ (Kyrgyz)
@
14.74
9

59.5%
CPR (Cypriot)
+
40.5%
HKS (Hakas)
@
14.89
10

61.2%
CPR (Cypriot)
+
38.8%
ALT (Altaic)
@
15.02
11

63.3%
TRK (Turk)
+
36.7%
KZK (Kazakh)
@
15.17
12

67.8%
TRK (Turk)
+
32.2%
KGZ (Kyrgyz)
@
15.4
13

66.9%
TRK (Turk)
+
33.1%
HKS (Hakas)
@
15.53
14

64.3%
ASHK (Ashkenazi)
+
35.7%
KGZ (Kyrgyz)
@
15.63
15

68.4%
TRK (Turk)
+
31.6%
ALT (Altaic)
@
15.75
16

59.6%
ASHK (Ashkenazi)
+
40.4%
KZK (Kazakh)
@
15.76
17

67.3%
UZ (Uzbek)
+
32.7%
ARM (Armenian)
@
15.78
18

65.9%
UZ (Uzbek)
+
34.1%
NITAL (North-Italian)
@
15.83
19

67.9%
UZ (Uzbek)
+
32.1%
KSV (Albanian)
@
15.93
20

57.9%
SIC (Sicilian)
+
42.1%
KZK (Kazakh)
@
16.16
Gedmatch.Com
MDLP K=8 4-Ancestors Oracle
This program is based on 4-Ancestors Oracle Version 0.96 by Alexandr Burnashev.
Questions about results should be sent to him at: Alexandr.Burnashev@gmail.com
Original concept proposed by Sergey Kozlov.
Many thanks to Alexandr for helping us get this web version developed.

Revised: Dec 6, 2012

8 components mode.
Component threshold auto-set to 1.510%. Admix results below that value will not be considered.


Kit Number: F229750

Admix Results (sorted):

#
Population
Percent
1
Altaic_Turkic
31.65
2
Caucasian
27.01
3
Paleo_Mediterranean
23.58
4
South_Central_Asian
14.23
5
Volga_Finnic
3.53


--------------------------------

Least-squares method.

Using 1 population approximation:
1 UZ @ 26.793
2 NOG @ 32.246
3 TRK @ 36.380
4 ASHK @ 39.826
5 SIC @ 42.419
6 CITAL @ 42.633
7 GRK @ 42.751
8 BSHK @ 43.315
9 CPR @ 46.320
10 NITAL @ 47.456
73 iterations.



Using 2 populations approximation:
1 50% ASHK +50% UZ @ 13.861
2 50% SIC +50% UZ @ 14.241
3 50% CPR +50% UZ @ 14.464
4 50% CPR +50% KZK @ 14.496
5 50% TRK +50% UZ @ 15.765
6 50% GRK +50% UZ @ 15.941
7 50% CITAL +50% UZ @ 16.215
8 50% CPR +50% HKS @ 17.552
9 50% CPR +50% KGZ @ 17.687
10 50% KZK +50% SIC @ 18.089
2701 iterations.



Using 3 populations approximation:
1 50% CPR +25% KGZ +25% UZ @ 12.119
2 50% CPR +25% KZK +25% UZ @ 12.209
3 50% UZ +25% SIC +25% TRK @ 12.420
4 50% CPR +25% HKS +25% UZ @ 12.503
5 50% CPR +25% ALT +25% UZ @ 12.538
6 50% UZ +25% CPR +25% UZ @ 12.567
7 50% CPR +25% BSHK +25% KGZ @ 12.867
8 50% UZ +25% ASHK +25% TRK @ 12.891
9 50% UZ +25% ASHK +25% CPR @ 13.394
10 50% UZ +25% CPR +25% SIC @ 13.410
92638 iterations.



Using 4 populations approximation:
1 CPR + CPR + KGZ + UZ @ 12.119
2 KZK + SIC + TRK + UZ @ 12.167
3 CPR + CPR + KZK + UZ @ 12.209
4 CPR + KGZ + SIC + UZ @ 12.212
5 CPR + KZK + TRK + UZ @ 12.231
6 CPR + KZK + SIC + UZ @ 12.269
7 ARM + KGZ + SIC + UZ @ 12.389
8 ASHK + CPR + KZK + UZ @ 12.394
9 SIC + TRK + UZ + UZ @ 12.420
10 ASHK + CPR + KGZ + UZ @ 12.437
11 ARM + KZK + SIC + UZ @ 12.480
12 CPR + CPR + HKS + UZ @ 12.503
13 ALT + CPR + CPR + UZ @ 12.538
14 CPR + UZ + UZ + UZ @ 12.567
15 KGZ + SIC + TRK + UZ @ 12.615
16 CPR + KGZ + TRK + UZ @ 12.645
17 CPR + GRK + KGZ + UZ @ 12.707
18 ASHK + KZK + TRK + UZ @ 12.785
19 CPR + GRK + KZK + UZ @ 12.825
20 BSHK + CPR + CPR + KGZ @ 12.867

240385 iterations.

Done.
Elapsed time 0.1220 seconds.
Gedmatch.Com
MDLP K=8 Oracle-x Population Fitting
This program is based on Larry Smiser's Population Fitting spreadsheet.
Questions about the method or results should be sent to him at lwsmiser@gmail.com


Finished reading population data.
73 populations found.
8 population clusters.

Kit Number: F229750

Admix Results:

#
Population
Percent
1
Altaic_Turkic
31.41
2
Paleo_Scandinavian
0.76
3
South_Central_Asian
14.12
4
East_European
0.00
5
West_European
0.00
6
Caucasian
26.81
7
Paleo_Mediterranean
23.40
8
Volga_Finnic
3.50


Pct. Calc. Option 2

0
Unable to determine
0.01%
1
UZ
39.36%
2
SIC
26.47%
3
GYP
8.69%
4
KGZ
5.82%
5
TRK
5.74%
6
ARM
5.14%
7
CPR
3.74%
8
KZK
2.95%
9
ALT
2.08%
10
ASHK
0.00%

Total RMSD: 2.622407


Elapsed time 0.4133 seconds.

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