sábado, 29 de março de 2014

My Autossomal MDLP K=9 Admixture Proportions

My Autossomal MDLP K=9 Admixture Proportions
GENY DOS SANTOS FLORENTINO
My Autossomal MDLP K=9 Admixture Proportions

MDLP K=9 Admixture Proportions


Magnus Ducatus Lituaniae Project K=9

For questions or comments about this project or your results, please email vadimverenich@gmail.com or visit the BGA project

MDLP was designed for individuals with European and some Eurasian ancestry (mostly Finno-Uralic and Altaic). This tool is not recommended for inferring African-American, East-Asian etc. ancestry.

Kit Number: F229750   Iteration: 1000   Delta-Q: 1.352374e-02   Elapsed Time: 79.30 seconds

Population 
Paleo_Balkanic-    
Caucasian26.41%
East_European-    
Volga_Finnic3.48%
South_Central_Asian14.07%
Paleo_Mediterranean23.99%
Altaic_Turkic31.34%
West_European-    
Paleo_Scandinavian0.71%




GEDmatch.Com Oracle
This program is based on 'Oracle v1' by Dienekes Pontikos. His original program was developed as part of the Dodecad Ancestry Project. More information on Dienekes' orignal program can be found here.

Many thanks also to 
Zack Ajmal for helping us get this web version of Dienekes' Oracle program developed.


MDLP K=9 Oracle results:
Kit F229750

Admix Results (sorted):

#
Population
Percent
1
Altaic_Turkic
31.34
2
Caucasian
26.41
3
Paleo_Mediterranean
23.99
4
South_Central_Asian
14.07
5
Volga_Finnic
3.48
6
Paleo_Scandinavian
0.71

Single Population Sharing:

#
Population (source)
Distance
1
UZ (Uzbek)
25.62
2
NOG (Nogai)
28.1
3
TRK (Turk)
33.18
4
ASHK (Ashkenazi)
37.75
5
BSHK (Bashkir)
38.4
6
CITAL (Central-Italian)
39.87
7
GRK (Greek)
39.91
8
SIC (Sicilian)
39.94
9
TTR (Tatar)
42.75
10
CPR (Cypriot)
43.12
11
NITAL (North-Italian)
43.2
12
RMN (Romanian)
43.29
13
GGZ (Gagauz)
43.94
14
BLG (Bulgarian)
44.75
15
CRS (Corsican)
46.03
16
ARM (Armenian)
46.61
17
MCD (Macedonian)
46.88
18
MNT (Montenegrin)
48.37
19
PRT (Portuguese)
49.45
20
SRB (Serbian)
49.86

Mixed Mode Population Sharing:

#

Primary Population (source)
Secondary Population (source)
Distance
1

63.8%
UZ (Uzbek)
+
36.2%
CPR (Cypriot)
@
9.21
2

62.1%
UZ (Uzbek)
+
37.9%
SIC (Sicilian)
@
9.85
3

60.8%
UZ (Uzbek)
+
39.2%
ASHK (Ashkenazi)
@
10.29
4

62.5%
UZ (Uzbek)
+
37.5%
GRK (Greek)
@
11.53
5

62.6%
UZ (Uzbek)
+
37.4%
CITAL (Central-Italian)
@
11.62
6

55.7%
CPR (Cypriot)
+
44.3%
KZK (Kazakh)
@
12.43
7

60.6%
CPR (Cypriot)
+
39.4%
KGZ (Kyrgyz)
@
13.07
8

58.1%
UZ (Uzbek)
+
41.9%
TRK (Turk)
@
13.09
9

59.6%
CPR (Cypriot)
+
40.4%
HKS (Hakas)
@
13.19
10

61.1%
CPR (Cypriot)
+
38.9%
ALT (Altaic)
@
13.31
11

63.1%
TRK (Turk)
+
36.9%
KZK (Kazakh)
@
13.87
12

64.2%
ASHK (Ashkenazi)
+
35.8%
KGZ (Kyrgyz)
@
13.98
13

59.5%
ASHK (Ashkenazi)
+
40.5%
KZK (Kazakh)
@
14.12
14

67.7%
TRK (Turk)
+
32.3%
KGZ (Kyrgyz)
@
14.12
15

65.7%
UZ (Uzbek)
+
34.3%
NITAL (North-Italian)
@
14.16
16

66.8%
TRK (Turk)
+
33.2%
HKS (Hakas)
@
14.22
17

62.7%
SIC (Sicilian)
+
37.3%
KGZ (Kyrgyz)
@
14.24
18

58%
SIC (Sicilian)
+
42%
KZK (Kazakh)
@
14.28
19

68.3%
TRK (Turk)
+
31.7%
ALT (Altaic)
@
14.42
20

67.7%
UZ (Uzbek)
+
32.3%
ARM (Armenian)
Gedmatch.Com
MDLP K=9 4-Ancestors Oracle
This program is based on 4-Ancestors Oracle Version 0.96 by Alexandr Burnashev.
Questions about results should be sent to him at: Alexandr.Burnashev@gmail.com
Original concept proposed by Sergey Kozlov.
Many thanks to Alexandr for helping us get this web version developed.

Revised: Dec 6, 2012

9 components mode.
Component threshold auto-set to 1.340%. Admix results below that value will not be considered.


Kit Number: F229750

Admix Results (sorted):

#
Population
Percent
1
Altaic_Turkic
31.57
2
Caucasian
26.60
3
Paleo_Mediterranean
24.16
4
South_Central_Asian
14.17
5
Volga_Finnic
3.51


--------------------------------

Least-squares method.

Using 1 population approximation:
1 UZ @ 26.906
2 NOG @ 32.326
3 TRK @ 36.074
4 ASHK @ 39.781
5 SIC @ 41.993
6 CITAL @ 42.096
7 GRK @ 42.125
8 BSHK @ 43.480
9 CPR @ 45.911
10 NITAL @ 46.564
73 iterations.



Using 2 populations approximation:
1 50% ASHK +50% UZ @ 13.659
2 50% SIC +50% UZ @ 13.840
3 50% CPR +50% UZ @ 14.293
4 50% CPR +50% KZK @ 14.376
5 50% GRK +50% UZ @ 15.693
6 50% CITAL +50% UZ @ 15.767
7 50% TRK +50% UZ @ 15.802
8 50% CPR +50% HKS @ 17.403
9 50% CPR +50% KGZ @ 17.586
10 50% KZK +50% SIC @ 17.658
2701 iterations.



Using 3 populations approximation:
1 50% CPR +25% KGZ +25% UZ @ 11.997
2 50% CPR +25% KZK +25% UZ @ 12.065
3 50% UZ +25% SIC +25% TRK @ 12.299
4 50% CPR +25% HKS +25% UZ @ 12.353
5 50% CPR +25% ALT +25% UZ @ 12.400
6 50% UZ +25% CPR +25% UZ @ 12.697
7 50% CPR +25% BSHK +25% KGZ @ 12.743
8 50% UZ +25% ASHK +25% TRK @ 12.788
9 50% UZ +25% CPR +25% SIC @ 13.183
10 50% UZ +25% ASHK +25% CPR @ 13.245
95018 iterations.



Using 4 populations approximation:
1 CPR + KGZ + SIC + UZ @ 11.981
2 CPR + CPR + KGZ + UZ @ 11.997
3 CPR + KZK + SIC + UZ @ 12.022
4 CPR + CPR + KZK + UZ @ 12.065
5 KZK + SIC + TRK + UZ @ 12.081
6 ASHK + CPR + KZK + UZ @ 12.242
7 CPR + KZK + TRK + UZ @ 12.280
8 ASHK + CPR + KGZ + UZ @ 12.298
9 SIC + TRK + UZ + UZ @ 12.299
10 CPR + CPR + HKS + UZ @ 12.353
11 ARM + KGZ + SIC + UZ @ 12.367
12 ALT + CPR + CPR + UZ @ 12.400
13 ARM + KZK + SIC + UZ @ 12.411
14 CPR + GRK + KGZ + UZ @ 12.545
15 KGZ + SIC + TRK + UZ @ 12.571
16 CPR + GRK + KZK + UZ @ 12.641
17 CITAL + CPR + KGZ + UZ @ 12.692
18 CPR + UZ + UZ + UZ @ 12.697
19 ASHK + KZK + TRK + UZ @ 12.725
20 CPR + KGZ + TRK + UZ @ 12.736

261017 iterations.

Done.

Elapsed time 0.1435 seconds.
Gedmatch.Com
MDLP K=9 Oracle-x Population Fitting
This program is based on Larry Smiser's Population Fitting spreadsheet.
Questions about the method or results should be sent to him at lwsmiser@gmail.com


Finished reading population data.
73 populations found.
9 population clusters.

Kit Number: F229750

Admix Results:

#
Population
Percent
1
Paleo_Balkanic
0.00
2
Caucasian
26.41
3
East_European
0.00
4
Volga_Finnic
3.48
5
South_Central_Asian
14.07
6
Paleo_Mediterranean
23.99
7
Altaic_Turkic
31.34
8
West_European
0.00
9
Paleo_Scandinavian
0.71


Pct. Calc. Option 2

1
UZ
40.54%
2
SIC
23.05%
3
GYP
9.86%
4
CPR
7.63%
5
KGZ
6.10%
6
TRK
5.15%
7
ARM
4.50%
8
KZK
2.07%
9
ALT
1.09%
10
ASHK
0.01%

Total RMSD: 2.289180


Elapsed time 0.4055 seconds.

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